Sara Montagna's Home Page » Publications » Sara Montagna’s Published Articles

Publications by Sara Montagna (2006—2020)

Below, publications by Sara Montagna between 2006 and 2020, ordered by year of publication.


2020 | 2019 | 2018 | 2017 | 2016 | 2015 | 2014 | 2013 | 2012 | 2011 | 2010 | 2009 | 2008 | 2007 | 2006

2020

Sara Montagna, Andrea Omicini
Agent-based Modelling in Multicellular Systems Biology
Data Analytics in Medicine: Concepts, Methodologies, Tools, and Applications, 2020

Sara Montagna, Stefano Mariani, Emiliano Gamberini, Alessandro Ricci, Franco Zambonelli
Complementing agents with cognitive services: a case study in healthcare
Journal of Medical Systems, 2020

Sara Montagna, Michele Braccini, Andrea Roli
The Impact of Self-loops on Boolean Networks Attractor Landscape and Implications for Cell Differentiation Modelling
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2020

Neil Vaughan, Eloisa Vargiu, Stefano Mariani, Sara Montagna, Michael Schumacher
Guest Editorial: Healthcare Intelligent Multi Agent Systems
Journal of Medical Systems 44(138), 2020

Sara Montagna, Angelo Croatti, Alessandro Ricci, Vanni Agnoletti, Vittorio Albarello, Emiliano Gamberini
Real-time tracking and documentation in trauma management
Health Informatics Journal 26(1), 2020

[top]

2019

Angelo Croatti, Sara Montagna, Alessandro Ricci, Emiliano Gamberini, Vittorio Albarello, Vanni Agnoletti
BDI Personal Medical Assistant Agents: The Case of Trauma Tracking and Alerting
Artificial Intelligence in Medicine 96, May 2019

Michele Braccini, Sara Montagna, Andrea Roli
Self-loops Favour Diversification and Asymmetric Transitions Between Attractors in Boolean Network Models
Artificial Life and Evolutionary Computation, 2019

Michele Braccini, Andrea Roli, Marco Villani, Sara Montagna, Roberto Serra
A simplified model of chromatin dynamics drives differentiation process in Boolean models of GRN
The 2019 Conference on Artificial Life, 2019

Sara Montagna, Angelo Croatti, Alessandro Ricci, Vanni Agnoletti, Vittorio Albarello
Pervasive Tracking for Time-Dependent Acute Patient Flow: A Case Study in Trauma Management
2019 IEEE 32nd International Symposium on Computer-Based Medical Systems (CBMS), June 2019

[top]

2018

Sara Montagna, Michele Braccini, Andrea Roli
The Impact of Self-loops in Random Boolean Network Dynamics: A Simulation Analysis
Artificial Life and Evolutionary Computation, 2018

[top]

2017

Sara Montagna, Andrea Omicini
Agent-based Modelling in Multicellular Systems Biology
Multi-Agent Based Simulations Applied to Biological and Environmental Systems, Advances in Computational Intelligence and Robotics (ACIR), February 2017

Sara Montagna, Pedro H. Abreu, Sylvain Giroux, Michael I. Schumacher
Preface
Agents and Multi-Agent Systems for Health Care, Lecture Notes in Computer Science 10685, 2017

Sara Montagna, Michele Braccini, Andrea Roli
The impact of self-loops in random boolean network dynamics
WIVACE 2017 -- Book of Abstracts, September 2017

Angelo Croatti, Sara Montagna, Alessandro Ricci
A Personal Medical Digital Assistant Agent for Supporting Human Operators in Emergency Scenarios
Autonomous Agents and Multiagent Systems, Lecture Notes in Computer Science 10643, 2017

Sara Montagna, Andrea Omicini
Agent-based Modelling for the Self-Management of Chronic Diseases: An Exploratory Study
Simulation: Transactions of the Society for Modeling and Simulation International 93(9), September 2017

Angelo Croatti, Sara Montagna, Alessandro Ricci
A Personal Medical Digital Assistant Agent for Supporting Human Operators in Emergency Scenarios
Agents and Multi-Agent Systems for Health Care, Lecture Notes in Computer Science 10685, 2017

[top]

2016

Sara Montagna, Andrea Omicini, Danilo Pianini
Extending the Gillespie's Stochastic Simulation Algorithm for Integrating Discrete-Event and Multi-Agent Based Simulation
Multi-Agent Based Simulation XVI. International Workshop, MABS 2015, Istanbul, Turkey, May 5, 2015, Revised Selected Papers, Lecture Notes in Computer Science 9568, 15 March 2016

Maura Cárdenas-García, Pedro Pablo González-Pérez, Sara Montagna, Oscar Sánchez Cortés, Elena Hernández Caballero
Modeling intercellular communication as a survival strategy of cancer cells: An in-silico approach on a flexible bioinformatics framework
Bioinformatics and Biology Insights 10, March 2016

Sara Montagna, Andrea Omicini, Francesco Degli Angeli, Michele Donati
Towards the Adoption of Agent-Based Modelling and Simulation in Mobile Health Systems for the Self-Management of Chronic Diseases
WOA 2016 – 17th Workshop “From Objects to Agents”, CEUR Workshop Proceedings 1664, 29-30 July 2016

Simon Dobson, Mirko Viroli, Jose Luis Fernandez-Marquez, Franco Zambonelli, Graeme Stevenson, Giovanna Di Marzo Serugendo, Sara Montagna, Danilo Pianini, Juan Ye, Gabriella Castelli, Alberto Rosi
Spatial awareness in pervasive ecosystems
The Knowledge Engineering Review 31(4), September 2016

[top]

2015

Franco Zambonelli, Andrea Omicini, Bernhard Anzengruber, Gabriella Castelli, Francesco L. DeAngelis, Giovanna Di Marzo Serugendo, Simon Dobson, Jose Luis Fernandez-Marquez, Alois Ferscha, Marco Mamei, Stefano Mariani, Ambra Molesini, Sara Montagna, Jussi Nieminen, Danilo Pianini, Matteo Risoldi, Alberto Rosi, Graeme Stevenson, Mirko Viroli, Juan Ye
Developing Pervasive Multi-Agent Systems with Nature-Inspired Coordination
Pervasive and Mobile Computing 17-B, February 2015

Mirko Viroli, Danilo Pianini, Sara Montagna, Graeme Stevenson, Franco Zambonelli
A coordination model of pervasive service ecosystems
Science of Computer Programming 110, 2015

Sara Montagna, Andrea Omicini, Danilo Pianini
Extending the Gillespie's Stochastic Simulation Algorithm for Integrating Discrete-Event and Multi-Agent Based Simulation
13th International Workshop on Multi-Agent-Based Simulation (MABS 2015), May 2015

Sara Montagna, Mirko Viroli, Andrea Roli
A framework supporting multi-compartment stochastic simulation and parameter optimisation for investigating biological system development
SIMULATION: Transactions of the Society for Modeling and Simulation International 91(7), June 2015

Sara Montagna, Andrea Omicini, Danilo Pianini
A Gillespie-based Computational Model for Integrating Event-driven and Multi-Agent Based Simulation
14th International Conference on Autonomous Agents and Multiagent Systems (AAMAS 2015), 4-8 May 2015

[top]

2013

Danilo Pianini, Sara Montagna, Mirko Viroli
Chemical-oriented Simulation of Computational Systems with ALCHEMIST
Journal of Simulation, 2013

Sara Montagna, Mirko Viroli, Jose Luis Fernandez-Marquez, Giovanna Di Marzo Serugendo, Franco Zambonelli
Injecting Self-organisation into Pervasive Service Ecosystems
Mobile Networks and Applications 18(3), 2013

Sara Montagna, Mirko Viroli
Composing Gradients for a Context-Aware Navigation of Users in a Smart-City
6th International Spatial Computing Workshop (SCW 2013), 6 May 2013

Graeme Stevenson, Jose Luis Fernandez-Marquez, Sara Montagna, Alberto Rosi, Juan Ye, Akla Tchao, Simon Dobson, Giovanna Di Marzo Serugendo, Mirko Viroli
Self-Organising Semantic Resource Discovery for Pervasive Systems
Self-Adaptive and Self-Organizing Systems Workshops (SASOW), apr 2013

Jose Luis Fernandez-Marquez, Giovanna Di Marzo Serugendo, Sara Montagna, Mirko Viroli, Josep Lluis Arcos
Description and composition of bio-inspired design patterns: a complete overview
Natural Computing 12(1), 2013

Graeme Stevenson, Juan Ye, Simon Dobson, Mirko Viroli, Sara Montagna
Self-Organising Semantic Resource Discovery for Pervasive Systems
Self-Adaptive and Self-Organizing Systems Workshops (SASOW), apr 2013

Pedro Pablo González-Pérez, Maura Cárdenas-García, Sara Montagna
Understanding the PI3K/AKT Anti-Apoptotic Signalling Pathway: a Tuple Space-Based Computational Framework for Simulating the Signal Transduction
Journal of Computations & Modelling 3(2), 2013

Graeme Stevenson, Juan Ye, Simon Dobson, Danilo Pianini, Sara Montagna, Mirko Viroli
Combining self-organisation, context-awareness and semantic reasoning: the case of resource discovery in opportunistic networks
Proceedings of the 28th ACM Symposium On Applied Computing (SAC 2013), March 2013

[top]

2012

Maura Cárdenas-García, Pedro Pablo González-Pérez, Sara Montagna
Simulation of caspases apoptotic signalling pathway in a tuple space-based bioinformatics infrastructure
EMBnet.journal 18(B), 2012

Sara Montagna, Mirko Viroli, Danilo Pianini, Jose Luis Fernandez-Marquez
Towards a comprehensive approach to spontaneous self-composition in pervasive ecosystems
Proceedings of the 13th Workshop on Objects and Agents, 12 September 2012

Sara Montagna, Danilo Pianini, Mirko Viroli
A Model for Drosophila Melanogaster Development from a Single Cell to Stripe Pattern Formation
Proceedings of the 27th Annual ACM Symposium on Applied Computing (SAC 2012) , 26-30 March 2012

Mirko Viroli, Danilo Pianini, Sara Montagna, Graeme Stevenson
Pervasive Ecosystems: a Coordination Model based on Semantic Chemistry
Proceedings of the 27th Annual ACM Symposium on Applied Computing (SAC 2012) , 26-30 March 2012

José Luis Fernandez-Marquez, Sara Montagna, Andrea Omicini, Franco Zambonelli
ASENSIS 2012 - First International Workshop on Adaptive Service Ecosystems: Nature and Socially Inspired Solutions
Self-Adaptive and Self-Organizing Systems Workshops (SASOW), 2012

Graeme Stevenson, Mirko Viroli, Juan Ye, Sara Montagna, Simon Dobson
Self-organising Semantic Resource Discovery for Pervasive Systems
1st International Workshop on Adaptive Service Ecosystems: Natural and Socially Inspired Solutions (ASENSIS 2012), 10 September 2012

Jose Luis Fernandez-Marquez, Giovanna Di Marzo Serugendo, Sara Montagna
BIO-CORE: Bio-inspired Self-organising Mechanisms Core
Bio-Inspired Models of Networks, Information, and Computing Systems, Lecture Notes of the Institute for Computer Sciences, Social Informatics and Telecommunications Engineering 103, 2012

Sara Montagna, Danilo Pianini, Mirko Viroli
Gradient-based Self-organisation Patterns of Anticipative Adaptation
Proceedings of 6th IEEE International Conference on Self-Adaptive and Self-Organizing Systems (SASO 2012), May 2012

Sara Montagna, Mirko Viroli
A Computational Framework for Multilevel Morphologies
Morphogenetic Engineering, Understanding Complex Systems, 2012

[top]

2011

Jose Luis Fernandez-Marquez, Josep Lluis Arcos, Giovanna Di Marzo Serugendo, Mirko Viroli, Sara Montagna
Description and Composition of Bio-Inspired Design Patterns: the Gradient Case
Proceedings of the 3rd Workshop on Bio-Inspired and Self-* Algorithms for Distributed Systems, 14 June 2011

Danilo Pianini, Mirko Viroli, Sara Montagna
A Simulation Framework for Pervasive Services Ecosystems
WOA 2011 - XII Workshop Nazionale “Dagli Oggetti agli Agenti”, CEUR Workshop Proceedings 741, 4-6 July 2011

Danilo Pianini, Sara Montagna, Mirko Viroli
A Chemical Inspired Simulation Framework for Pervasive Services Ecosystems
Proceedings of the Federated Conference on Computer Science and Information Systems (FedCSIS 2011), 18-21 September 2011

Sara Montagna, Mirko Viroli, Matteo Risoldi, Danilo Pianini, Giovanna Di Marzo Serugendo
Self-organising Pervasive Ecosystems: A Crowd Evacuation Example
Proceedings of the 3rd International Workshop on Software Engineering for Resilient Systems, Lecture Notes in Computer Science 6968, 29-30 September 2011

Mirko Viroli, Matteo Casadei, Sara Montagna, Franco Zambonelli
Spatial Coordination of Pervasive Services through Chemical-inspired Tuple Spaces
ACM Transactions on Autonomous and Adaptive Systems 6(2), June 2011

Franco Zambonelli, Gabriella Castelli, Laura Ferrari, Marco Mamei, Alberto Rosi, Giovanna Di Marzo Serugendo, Matteo Risoldi, Akla-Esso Tchao, Simon Dobson, Graeme Stevenson, Yuan Ye, Elena Nardini, Andrea Omicini, Sara Montagna, Mirko Viroli, Alois Ferscha, Sascha Maschek, Bernhard Wally
Self-aware Pervasive Service Ecosystems
Proceedings of the 2nd European Future Technologies Conference and Exhibition 2011 (FET 11), Procedia Computer Science 7, 4-6 May 2011

[top]

2010

Sara Montagna, Nicola Donati, Andrea Omicini
An Agent-based Model for the Pattern Formation in Drosophila Melanogaster
Artificial Life XII, 19-23 August 2010

Sara Montagna, Andrea Omicini, Alessandro Ricci
A Multiscale Agent-based Model of Morphogenesis in Biological Systems
WOA 2010 — Dagli oggetti agli agenti. Modelli e tecnologie per sistemi complessi: context-dependent, knowledge-intensive, nature-inspired e self-* , CEUR Workshop Proceedings 621, 5-7 September 2010

Sara Montagna, Mirko Viroli
A Framework for Modelling and Simulating Networks of Cells
Proceedings of the 1st International Workshop on Interactions between Computer Science and Biology (CS2Bio'10) Volume 268, 21 December 2010

[top]

2009

Mark d'Inverno, Paul Howells, Sara Montagna, Ingo Roeder, Rob Saunders
Agent-based Modelling of Stem Cells
Multi-Agent Systems: Simulation and Applications, Computational Analysis, Synthesis, and Design of Dynamic Systems, June 2009

Sara Montagna, Mirko Viroli
A computational framework for modelling multicellular biochemistry
2009 IEEE Congress on Evolutionary Computation (CEC 2009), 18-21 May 2009

Carlos Castro Gonzalez, Miguel Angel Luengo-Oroz, Sophie Desnoulez, Louise Duloquin, Laura Fernández-de-Manuel, Sara Montagna, Maria J. Ledesma-Carbayo, Paul Bourgine, Nadine Peyrieras, Andres Santos
An Automatic Quantification and Registration Strategy to Create a Gene Expression Atlas of Zebrafish Embryogenesis
31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC 2009), 2-6 September 2009

Mirko Viroli, Franco Zambonelli, Matteo Casadei, Sara Montagna
A Biochemical Metaphor for Developing Eternally Adaptive Service Ecosystems
24th Annual ACM Symposium on Applied Computing (SAC 2009), March, 8-12 2009

Sara Montagna, Andrea Roli
Parameter tuning of a stochastic biological simulator by metaheuristics
AI*IA 2009: Emergent Perspectives in Artificial Intelligence -- XIth International Conference of the Italian Association for Artificial Intelligence Reggio Emilia, Italy, December 9-12, 2009 Proceedings, Lecture Notes in Computer Science 5883, 2009

[top]

2008

Sara Montagna, Andrea Omicini, Marco Alberti
Lineage Commitment of Hematopoietic Stem Cells: An Agent-based Model
Intelligenza Artificiale e Scienze della Vita, September 2008

Sara Montagna, Alessandro Ricci, Andrea Omicini
A&A for Modelling and Engineering Simulations in Systems Biology
International Journal of Agent-Oriented Software Engineering 2(2), 2008

[top]

2006

Sara Montagna, Alessandro Ricci, Andrea Omicini
Agents & Artifacts for Systems Biology: Toward a Framework based on TuCSoN
Industrial Simulation Conference 2006 (ISC 2006), 5-7 June 2006

[top]