Wiki source code of MS-BioNET

Last modified by Andrea Omicini on 07/10/2020 22:28

Show last authors
1 1 MS-BioNET Home
2
3 MS-BioNet (MultiScale-Biochemical NETwork) is a computational framework for modelling and simulating large networks of compartments hosting a chemical solution and communicating through an enhanced model of chemical reaction addressing molecule transfer.
4
5 The framework provides:
6 * a logic-oriented specification language that is used to flexibly specify simulation scenarios providing constructs to directly express biochemical reactions, compartments, compartment link topology, and reactions involving selective transfer through membranes
7 * a simulation engine to perform stochastic simulation using the Gillespie's SSA
8 * a module for parameter optimisation
9
10 *Contact*: [Sara Montagna|SaraMontagna.WebHome]
Partita IVA: 01131710376 - Copyright © 2008-2021 APICe@DISI Research Group - PRIVACY