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MS-BioNET Home

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The framework provides:

  • a logic-oriented specification language that is used to flexibly specify simulation scenarios providing constructs to directly express biochemical reactions, compartments, compartment link topology, and reactions involving selective transfer through membranes
  • a simulation engine to perform stochastic simulation using the Gillespie's SSA
  • a module for parameter optimisation

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Contacts

Sara Montagna email