Per Year
@article{MBR-tcbb2020,
author = {Montagna, Sara and Braccini, Michele and Roli, Andrea},
doi = {10.1109/TCBB.2020.2968310},
issn = {2374-0043},
journal = {IEEE/ACM Transactions on Computational Biology and Bioinformatics},
keywords = {Genetic regulatory networks model;Boolean networks;Self-Loops;Cell Differentiation},
note = {Pre-print},
pages = {1--12},
title = {{The Impact of Self-loops on Boolean Networks Attractor Landscape and Implications for Cell Differentiation Modelling}},
url = {https://ieeexplore.ieee.org/document/8966265},
year = 2020
}
author = {Montagna, Sara and Braccini, Michele and Roli, Andrea},
doi = {10.1109/TCBB.2020.2968310},
issn = {2374-0043},
journal = {IEEE/ACM Transactions on Computational Biology and Bioinformatics},
keywords = {Genetic regulatory networks model;Boolean networks;Self-Loops;Cell Differentiation},
note = {Pre-print},
pages = {1--12},
title = {{The Impact of Self-loops on Boolean Networks Attractor Landscape and Implications for Cell Differentiation Modelling}},
url = {https://ieeexplore.ieee.org/document/8966265},
year = 2020
}
@inproceedings{Braccini-WIVACE2019,
address = {Cham},
author = {Braccini, Michele and Montagna, Sara and Roli, Andrea},
booktitle = {Artificial Life and Evolutionary Computation},
editor = {Cagnoni, Stefano},
iris = {11585/691048},
isbn = {978-3-030-21733-4},
pages = {30--41},
publisher = {Springer International Publishing},
scopus = {2-s2.0-85067202680},
title = {Self-loops Favour Diversification and Asymmetric Transitions Between Attractors in Boolean Network Models},
url = {https://link.springer.com/10.1007/978-3-030-21733-4_3},
year = 2019
}
address = {Cham},
author = {Braccini, Michele and Montagna, Sara and Roli, Andrea},
booktitle = {Artificial Life and Evolutionary Computation},
editor = {Cagnoni, Stefano},
iris = {11585/691048},
isbn = {978-3-030-21733-4},
pages = {30--41},
publisher = {Springer International Publishing},
scopus = {2-s2.0-85067202680},
title = {Self-loops Favour Diversification and Asymmetric Transitions Between Attractors in Boolean Network Models},
url = {https://link.springer.com/10.1007/978-3-030-21733-4_3},
year = 2019
}
@inproceedings{Braccini-ALIFE2019,
author = {Braccini, Michele and Roli, Andrea and Villani, Marco and Montagna, Sara and Serra, Roberto},
booktitle = {The 2019 Conference on Artificial Life},
doi = {10.1162/isal_a_00163},
iris = {11585/693154},
number = 31,
pages = {211-217},
title = {A simplified model of chromatin dynamics drives differentiation process in Boolean models of {GRN}},
url = {https://www.mitpressjournals.org/doi/abs/10.1162/isal_a_00163},
year = 2019
}
author = {Braccini, Michele and Roli, Andrea and Villani, Marco and Montagna, Sara and Serra, Roberto},
booktitle = {The 2019 Conference on Artificial Life},
doi = {10.1162/isal_a_00163},
iris = {11585/693154},
number = 31,
pages = {211-217},
title = {A simplified model of chromatin dynamics drives differentiation process in Boolean models of {GRN}},
url = {https://www.mitpressjournals.org/doi/abs/10.1162/isal_a_00163},
year = 2019
}
@inproceedings{Montagna-WIVACE2017,
address = {Cham},
author = {Montagna, Sara and Braccini, Michele and Roli, Andrea},
booktitle = {Artificial Life and Evolutionary Computation},
doi = {10.1007/978-3-319-78658-2_8},
editor = {Pelillo, Marcello and Poli, Irene and Roli, Andrea and Serra, Roberto and Slanzi, Debora and Villani, Marco},
isbn = {978-3-319-78658-2},
pages = {104--115},
publisher = {Springer International Publishing},
scopus = {2-s2.0-85045231827},
title = {The Impact of Self-loops in Random Boolean Network Dynamics: A Simulation Analysis},
url = {https://link.springer.com/10.1007/978-3-319-78658-2_8},
year = 2018
}
address = {Cham},
author = {Montagna, Sara and Braccini, Michele and Roli, Andrea},
booktitle = {Artificial Life and Evolutionary Computation},
doi = {10.1007/978-3-319-78658-2_8},
editor = {Pelillo, Marcello and Poli, Irene and Roli, Andrea and Serra, Roberto and Slanzi, Debora and Villani, Marco},
isbn = {978-3-319-78658-2},
pages = {104--115},
publisher = {Springer International Publishing},
scopus = {2-s2.0-85045231827},
title = {The Impact of Self-loops in Random Boolean Network Dynamics: A Simulation Analysis},
url = {https://link.springer.com/10.1007/978-3-319-78658-2_8},
year = 2018
}
@incollection{rbn-wivace2017,
author = {Montagna, Sara and Braccini, Michele and Roli, Andrea},
booktitle = {WIVACE 2017 -- Book of Abstracts},
editor = {Roli, Andrea and Slanzi, Debora and Villani, Marco},
isbn = {978-88-903581-3-5},
location = {Venice, Italy},
month = {19--21~} # sep,
note = {Extended Abstract},
pag = {83--86},
title = {The impact of self-loops in random boolean network dynamics},
year = 2017
}
author = {Montagna, Sara and Braccini, Michele and Roli, Andrea},
booktitle = {WIVACE 2017 -- Book of Abstracts},
editor = {Roli, Andrea and Slanzi, Debora and Villani, Marco},
isbn = {978-88-903581-3-5},
location = {Venice, Italy},
month = {19--21~} # sep,
note = {Extended Abstract},
pag = {83--86},
title = {The impact of self-loops in random boolean network dynamics},
year = 2017
}
@article{msbionet-simulation91,
author = {Montagna, Sara and Viroli, Mirko and Roli, Andrea},
doi = {10.1177/0037549715585569},
eissn = {1741-3133},
issn = {0037-5497},
journal = {SIMULATION: Transactions of the Society for Modeling and Simulation International},
keywords = {Multicellular systems biology, developmental biology, spatial stochastic multiscale model, Drosophila melanogaster, parameter estimation, metaheuristics},
month = jun,
number = 7,
pages = {666--685},
publisher = {SAGE},
title = {A framework supporting multi-compartment stochastic simulation and parameter optimisation for investigating biological system development},
volume = 91,
year = 2015
}
author = {Montagna, Sara and Viroli, Mirko and Roli, Andrea},
doi = {10.1177/0037549715585569},
eissn = {1741-3133},
issn = {0037-5497},
journal = {SIMULATION: Transactions of the Society for Modeling and Simulation International},
keywords = {Multicellular systems biology, developmental biology, spatial stochastic multiscale model, Drosophila melanogaster, parameter estimation, metaheuristics},
month = jun,
number = 7,
pages = {666--685},
publisher = {SAGE},
title = {A framework supporting multi-compartment stochastic simulation and parameter optimisation for investigating biological system development},
volume = 91,
year = 2015
}
@proceedings{montagnaroli-AIxIA09,
series = {Lecture Notes in Computer Science},
booktitle = {AI*IA 2009: Emergent Perspectives in Artificial Intelligence -- XIth International Conference of the Italian Association for Artificial Intelligence Reggio Emilia, Italy, December 9-12, 2009 Proceedings},
publisher = {Springer Berlin / Heidelberg},
author = {Montagna, Sara and Roli, Andrea},
title = {Parameter tuning of a stochastic biological simulator by metaheuristics},
isbn = {978-3-642-10290-5},
year = 2009,
status = {Published},
pages = {466--475},
venue = {--},
editor = {Serra, Roberto and Cucchiara, Rita},
volume = 5883,
doi = {10.1007/978-3-642-10291-2}}
series = {Lecture Notes in Computer Science},
booktitle = {AI*IA 2009: Emergent Perspectives in Artificial Intelligence -- XIth International Conference of the Italian Association for Artificial Intelligence Reggio Emilia, Italy, December 9-12, 2009 Proceedings},
publisher = {Springer Berlin / Heidelberg},
author = {Montagna, Sara and Roli, Andrea},
title = {Parameter tuning of a stochastic biological simulator by metaheuristics},
isbn = {978-3-642-10290-5},
year = 2009,
status = {Published},
pages = {466--475},
venue = {--},
editor = {Serra, Roberto and Cucchiara, Rita},
volume = 5883,
doi = {10.1007/978-3-642-10291-2}}