Agent-based Modelling in Multicellular Systems Biology (book chapter, 2020) — Sara Montagna, Andrea Omicini
 Agent-based Modelling in Multicellular Systems Biology (book chapter, 2017) — Sara Montagna, Andrea Omicini
 Agent-based Modelling for the Self-Management of Chronic Diseases: An Exploratory Study (article in journal, 2017) — Sara Montagna, Andrea Omicini
 Towards the Adoption of Agent-Based Modelling and Simulation in Mobile Health Systems for the Self-Management of Chronic Diseases (paper in proceedings, 2016) — Sara Montagna, Andrea Omicini, Francesco Degli Angeli, Michele Donati
 Extending the Gillespie's Stochastic Simulation Algorithm for Integrating Discrete-Event and Multi-Agent Based Simulation (paper in proceedings, 2016) — Sara Montagna, Andrea Omicini, Danilo Pianini
 Developing Pervasive Multi-Agent Systems with Nature-Inspired Coordination (article in journal, 2015) — Franco Zambonelli, Andrea Omicini, Bernhard Anzengruber, Gabriella Castelli, Francesco L. DeAngelis, Giovanna Di Marzo Serugendo, Simon Dobson, José Luis Fernandez-Marquez, Alois Ferscha, Marco Mamei, Stefano Mariani, Ambra Molesini, Sara Montagna, Jussi Nieminen, Danilo Pianini, Matteo Risoldi, Alberto Rosi, Graeme Stevenson, Mirko Viroli, Juan Ye
 Extending the Gillespie's Stochastic Simulation Algorithm for Integrating Discrete-Event and Multi-Agent Based Simulation (paper in proceedings, 2015) — Sara Montagna, Andrea Omicini, Danilo Pianini
 A Gillespie-based Computational Model for Integrating Event-driven and Multi-Agent Based Simulation (paper in proceedings, 2015) — Sara Montagna, Andrea Omicini, Danilo Pianini
 ASENSIS 2012 – First International Workshop on Adaptive Service Ecosystems: Nature and Socially Inspired Solutions (paper in proceedings, 2012) — José Luis Fernandez-Marquez, Sara Montagna, Andrea Omicini, Franco Zambonelli
 Self-aware Pervasive Service Ecosystems (paper in proceedings, 2011) — Franco Zambonelli, Gabriella Castelli, Laura Ferrari, Marco Mamei, Alberto Rosi, Giovanna Di Marzo Serugendo, Matteo Risoldi, Akla-Esso Tchao, Simon Dobson, Graeme Stevenson, Yuan Ye, Elena Nardini, Andrea Omicini, Sara Montagna, Mirko Viroli, Alois Ferscha, Sascha Maschek, Bernhard Wally
 An Agent-based Model for the Pattern Formation in Drosophila Melanogaster (paper in proceedings, 2010) — Sara Montagna, Nicola Donati, Andrea Omicini
 A Multiscale Agent-based Model of Morphogenesis in Biological Systems  (paper in proceedings, 2010) — Sara Montagna, Andrea Omicini, Alessandro Ricci
 A&A for Modelling and Engineering Simulations in Systems Biology (article in journal, 2008) — Sara Montagna, Alessandro Ricci, Andrea Omicini
 Lineage Commitment of Hematopoietic Stem Cells: An Agent-based Model (paper in proceedings, 2008) — Sara Montagna, Andrea Omicini, Marco Alberti
 Modelling Hematopoietic Stem Cell Behaviour: An Approach Based on Multi-Agent Systems (paper in proceedings, 2007) — Sara Montagna, Andrea Omicini, Alessandro Ricci, Mark d'Inverno
 Agents & Artifacts for Systems Biology: Toward a Framework based on TuCSoN (paper in proceedings, 2006) — Sara Montagna, Alessandro Ricci, Andrea Omicini

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